Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AC011477.6-201ENST00000604980 1927 ntBASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 HLA-V-204ENST00000476601 1289 ntBASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AC097493.3-201ENST00000509725 367 ntBASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AC011467.4-201ENST00000594891 528 ntBASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AC092364.2-202ENST00000597012 1073 ntBASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AL158211.3-201ENST00000607385 239 ntBASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 AC018892.3-201ENST00000623986 2499 ntBASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 REXO1L1P-202ENST00000608646 1974 ntBASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LYSMD3Q7Z3D4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 DBET-201ENST00000630918 3363 ntBASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 KRT8P12-202ENST00000472924 1397 ntBASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 EEF1DP4-201ENST00000446006 880 ntBASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 IGHV3-42-201ENST00000520410 361 ntBASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 AC027369.6-201ENST00000525520 931 ntBASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 TEX28P1-201ENST00000613479 1221 ntBASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 TEX28P2-201ENST00000617764 1221 ntBASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
LYSMD3Q7Z3D4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LYSMD3Q7Z3D4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms