Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 AC023274.1-201ENST00000418278 595 ntBASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 AC105233.2-201ENST00000523697 349 ntBASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 AF228730.5-201ENST00000530288 346 ntBASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 AC040169.1-201ENST00000565382 521 ntBASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 SPTSSB-204ENST00000617024 1292 ntBASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 LINC02228-204ENST00000642115 2962 ntBASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST3H2AQ7L7L0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TFAMP1-201ENST00000412727 736 ntBASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 FAM58CP-201ENST00000435741 640 ntBASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AC091812.2-201ENST00000619081 385 ntBASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 DBET-201ENST00000630918 3363 ntBASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 AC126177.1-201ENST00000547829 2218 ntBASIC14.61□□□□□ -0.07
HIST3H2AQ7L7L0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST3H2AQ7L7L0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST3H2AQ7L7L0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST3H2AQ7L7L0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST3H2AQ7L7L0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST3H2AQ7L7L0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST3H2AQ7L7L0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
HIST3H2AQ7L7L0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms