Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 AL627231.1-201ENST00000394467 1125 ntBASIC20.03■□□□□ 0.8
BRWD3Q6RI45 RN7SKP175-201ENST00000408472 289 ntBASIC20.03■□□□□ 0.8
BRWD3Q6RI45 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 VDAC1P1-201ENST00000439229 848 ntBASIC20.03■□□□□ 0.8
BRWD3Q6RI45 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 AC005632.3-201ENST00000605544 308 ntBASIC20.03■□□□□ 0.8
BRWD3Q6RI45 FO393412.1-201ENST00000619841 382 ntBASIC20.03■□□□□ 0.8
BRWD3Q6RI45 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 NAP1L6-202ENST00000641404 1222 ntBASIC20.03■□□□□ 0.8
BRWD3Q6RI45 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRWD3Q6RI45 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 AC018463.1-201ENST00000456674 917 ntBASIC20.02■□□□□ 0.8
BRWD3Q6RI45 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 SNORD3B-2-202ENST00000571722 791 ntBASIC20.02■□□□□ 0.8
BRWD3Q6RI45 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRWD3Q6RI45 AC018892.3-201ENST00000623986 2499 ntBASIC20.02■□□□□ 0.8
BRWD3Q6RI45 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 ACTBP7-201ENST00000418351 1124 ntBASIC20.02■□□□□ 0.79
BRWD3Q6RI45 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 RN7SL163P-201ENST00000583100 276 ntBASIC20.02■□□□□ 0.79
BRWD3Q6RI45 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 AC138466.3-201ENST00000619983 221 ntBASIC20.02■□□□□ 0.79
BRWD3Q6RI45 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BRWD3Q6RI45 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.02■□□□□ 0.79
BRWD3Q6RI45 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 AL008718.2-201ENST00000609206 1313 ntBASIC20.01■□□□□ 0.79
BRWD3Q6RI45 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 PSMD4P1-201ENST00000433951 1109 ntBASIC20.01■□□□□ 0.79
BRWD3Q6RI45 ETV2-207ENST00000619399 994 ntTSL 5 BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 AC025262.2-201ENST00000623975 1056 ntBASIC20.01■□□□□ 0.79
BRWD3Q6RI45 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRWD3Q6RI45 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20■□□□□ 0.79
BRWD3Q6RI45 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20■□□□□ 0.79
BRWD3Q6RI45 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20■□□□□ 0.79
BRWD3Q6RI45 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20■□□□□ 0.79
BRWD3Q6RI45 TUBB8P8-201ENST00000458717 1058 ntBASIC20■□□□□ 0.79
BRWD3Q6RI45 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20■□□□□ 0.79
BRWD3Q6RI45 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
BRWD3Q6RI45 PP12613-201ENST00000424958 2230 ntBASIC20■□□□□ 0.79
BRWD3Q6RI45 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
BRWD3Q6RI45 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20■□□□□ 0.79
BRWD3Q6RI45 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BRWD3Q6RI45 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms