Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.79■□□□□ 0.28
DSC1Q08554 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
DSC1Q08554 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.79■□□□□ 0.28
DSC1Q08554 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.79■□□□□ 0.28
DSC1Q08554 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.79■□□□□ 0.28
DSC1Q08554 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
DSC1Q08554 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.79■□□□□ 0.28
DSC1Q08554 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.79■□□□□ 0.28
DSC1Q08554 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.79■□□□□ 0.28
DSC1Q08554 AC093813.1-201ENST00000605066 256 ntBASIC16.79■□□□□ 0.28
DSC1Q08554 AC107373.2-201ENST00000607735 490 ntBASIC16.79■□□□□ 0.28
DSC1Q08554 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.79■□□□□ 0.28
DSC1Q08554 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DSC1Q08554 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.79■□□□□ 0.28
DSC1Q08554 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DSC1Q08554 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.79■□□□□ 0.28
DSC1Q08554 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DSC1Q08554 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.79■□□□□ 0.28
DSC1Q08554 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DSC1Q08554 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.79■□□□□ 0.28
DSC1Q08554 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.79■□□□□ 0.28
DSC1Q08554 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DSC1Q08554 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DSC1Q08554 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
DSC1Q08554 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.78■□□□□ 0.28
DSC1Q08554 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
DSC1Q08554 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.78■□□□□ 0.28
DSC1Q08554 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
DSC1Q08554 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 ACKR1-201ENST00000368121 1240 ntBASIC16.78■□□□□ 0.28
DSC1Q08554 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.78■□□□□ 0.28
DSC1Q08554 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.78■□□□□ 0.28
DSC1Q08554 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.78■□□□□ 0.28
DSC1Q08554 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.78■□□□□ 0.28
DSC1Q08554 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.78■□□□□ 0.28
DSC1Q08554 AL355864.2-201ENST00000447420 863 ntBASIC16.78■□□□□ 0.28
DSC1Q08554 AC022137.2-201ENST00000503482 481 ntBASIC16.78■□□□□ 0.28
DSC1Q08554 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.78■□□□□ 0.28
DSC1Q08554 AP000812.2-201ENST00000538934 718 ntBASIC16.78■□□□□ 0.28
DSC1Q08554 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
DSC1Q08554 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.78■□□□□ 0.28
DSC1Q08554 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
DSC1Q08554 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.78■□□□□ 0.28
DSC1Q08554 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.78■□□□□ 0.28
DSC1Q08554 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.78■□□□□ 0.28
DSC1Q08554 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.78■□□□□ 0.28
DSC1Q08554 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
DSC1Q08554 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
DSC1Q08554 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 AC134312.5-201ENST00000568031 1313 ntBASIC16.77■□□□□ 0.28
DSC1Q08554 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.77■□□□□ 0.28
DSC1Q08554 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
DSC1Q08554 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.77■□□□□ 0.28
DSC1Q08554 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 AC099336.1-201ENST00000417053 1171 ntBASIC16.77■□□□□ 0.28
DSC1Q08554 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.77■□□□□ 0.28
DSC1Q08554 RPL7P3-201ENST00000441388 714 ntBASIC16.77■□□□□ 0.28
DSC1Q08554 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.77■□□□□ 0.28
DSC1Q08554 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.77■□□□□ 0.28
DSC1Q08554 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.77■□□□□ 0.28
DSC1Q08554 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.77■□□□□ 0.28
DSC1Q08554 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
DSC1Q08554 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DSC1Q08554 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.77■□□□□ 0.28
DSC1Q08554 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.77■□□□□ 0.28
DSC1Q08554 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.77■□□□□ 0.28
DSC1Q08554 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.77■□□□□ 0.28
DSC1Q08554 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.77■□□□□ 0.28
DSC1Q08554 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
DSC1Q08554 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DSC1Q08554 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DSC1Q08554 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
DSC1Q08554 AC018695.7-201ENST00000624587 2492 ntBASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms