Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP1Q04837 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
SSBP1Q04837 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP1Q04837 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SSBP1Q04837 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP1Q04837 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
SSBP1Q04837 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP1Q04837 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP1Q04837 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SSBP1Q04837 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP1Q04837 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.52□□□□□ -0.25
SSBP1Q04837 AL596275.1-201ENST00000423464 877 ntBASIC13.52□□□□□ -0.25
SSBP1Q04837 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.52□□□□□ -0.25
SSBP1Q04837 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP1Q04837 RPS15P9-201ENST00000494093 319 ntBASIC13.52□□□□□ -0.25
SSBP1Q04837 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP1Q04837 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.52□□□□□ -0.25
SSBP1Q04837 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.52□□□□□ -0.25
SSBP1Q04837 MTDHP4-201ENST00000600287 670 ntBASIC13.52□□□□□ -0.25
SSBP1Q04837 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
SSBP1Q04837 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SSBP1Q04837 WASH3P-207ENST00000560956 1394 ntBASIC13.52□□□□□ -0.25
SSBP1Q04837 FO538757.1-201ENST00000623083 1397 ntBASIC13.52□□□□□ -0.25
SSBP1Q04837 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SSBP1Q04837 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP1Q04837 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SSBP1Q04837 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 BEND3P1-201ENST00000421591 1944 ntBASIC13.52□□□□□ -0.25
SSBP1Q04837 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP1Q04837 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SSBP1Q04837 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP1Q04837 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SSBP1Q04837 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SSBP1Q04837 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SSBP1Q04837 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SSBP1Q04837 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.52□□□□□ -0.25
SSBP1Q04837 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SSBP1Q04837 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.52□□□□□ -0.25
SSBP1Q04837 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP1Q04837 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP1Q04837 AP000867.3-201ENST00000524675 377 ntBASIC13.51□□□□□ -0.25
SSBP1Q04837 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.51□□□□□ -0.25
SSBP1Q04837 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SSBP1Q04837 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SSBP1Q04837 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SSBP1Q04837 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.51□□□□□ -0.25
SSBP1Q04837 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP1Q04837 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP1Q04837 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms