Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL513210.1-201ENST00000629608 234 ntBASIC14.3□□□□□ -0.12
CLRN1P58418 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.3□□□□□ -0.12
CLRN1P58418 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.3□□□□□ -0.12
CLRN1P58418 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.3□□□□□ -0.12
CLRN1P58418 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLRN1P58418 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLRN1P58418 AC004461.1-201ENST00000412461 403 ntBASIC14.29□□□□□ -0.12
CLRN1P58418 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 AL139010.1-201ENST00000454878 894 ntBASIC14.29□□□□□ -0.12
CLRN1P58418 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.29□□□□□ -0.12
CLRN1P58418 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 RARRES2P9-201ENST00000565168 469 ntBASIC14.29□□□□□ -0.12
CLRN1P58418 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CLRN1P58418 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 AC046158.3-201ENST00000624947 2558 ntBASIC14.29□□□□□ -0.12
CLRN1P58418 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 AL691432.1-201ENST00000596308 1422 ntBASIC14.29□□□□□ -0.12
CLRN1P58418 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.29□□□□□ -0.12
CLRN1P58418 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLRN1P58418 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLRN1P58418 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.29□□□□□ -0.12
CLRN1P58418 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLRN1P58418 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.28□□□□□ -0.12
CLRN1P58418 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLRN1P58418 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.28□□□□□ -0.12
CLRN1P58418 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 AL627223.1-201ENST00000416693 442 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms