Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 AC018529.1-201ENST00000613063 361 ntBASIC14.68□□□□□ -0.06
CLDN20P56880 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLDN20P56880 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLDN20P56880 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLDN20P56880 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLDN20P56880 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CLDN20P56880 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CLDN20P56880 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN20P56880 U82695.1-201ENST00000635752 1889 ntBASIC14.67□□□□□ -0.06
CLDN20P56880 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN20P56880 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CLDN20P56880 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN20P56880 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN20P56880 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN20P56880 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN20P56880 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN20P56880 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN20P56880 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN20P56880 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN20P56880 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN20P56880 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN20P56880 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CLDN20P56880 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.67□□□□□ -0.06
CLDN20P56880 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN20P56880 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN20P56880 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN20P56880 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN20P56880 AC003101.2-201ENST00000612557 442 ntBASIC14.67□□□□□ -0.06
CLDN20P56880 AC093512.1-201ENST00000617969 520 ntBASIC14.67□□□□□ -0.06
CLDN20P56880 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN20P56880 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN20P56880 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN20P56880 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN20P56880 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CLDN20P56880 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 REXO1L8P-201ENST00000604378 1897 ntBASIC14.66□□□□□ -0.06
CLDN20P56880 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CLDN20P56880 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CLDN20P56880 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.66□□□□□ -0.06
CLDN20P56880 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 AC015911.4-201ENST00000588022 1070 ntBASIC14.66□□□□□ -0.06
CLDN20P56880 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CLDN20P56880 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN20P56880 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN20P56880 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.66□□□□□ -0.06
CLDN20P56880 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms