Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC134407.2-201ENST00000625089 1978 ntBASIC13.94□□□□□ -0.18
CLDN12P56749 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLDN12P56749 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 AL359258.3-201ENST00000622910 2331 ntBASIC13.93□□□□□ -0.18
CLDN12P56749 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 OR2I1P-209ENST00000641730 5365 ntBASIC13.93□□□□□ -0.18
CLDN12P56749 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 LINC00552-201ENST00000625151 2579 ntBASIC13.93□□□□□ -0.18
CLDN12P56749 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLDN12P56749 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CLDN12P56749 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN12P56749 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN12P56749 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 AC093724.1-201ENST00000448659 1027 ntBASIC13.93□□□□□ -0.18
CLDN12P56749 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN12P56749 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 AC091076.1-201ENST00000610741 619 ntBASIC13.93□□□□□ -0.18
CLDN12P56749 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 AC093458.2-201ENST00000623150 629 ntBASIC13.93□□□□□ -0.18
CLDN12P56749 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN12P56749 AC107918.4-202ENST00000641623 219 ntBASIC13.93□□□□□ -0.18
CLDN12P56749 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.93□□□□□ -0.18
CLDN12P56749 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN12P56749 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CLDN12P56749 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN12P56749 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDN12P56749 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN12P56749 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CLDN12P56749 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN12P56749 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN12P56749 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDN12P56749 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 SBF1P1-201ENST00000444527 5631 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN12P56749 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 AC073621.1-201ENST00000392730 636 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 HMGA1P7-201ENST00000406908 502 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN12P56749 KRT18P27-201ENST00000427733 1299 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN12P56749 AC136632.2-201ENST00000512891 861 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN12P56749 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.92□□□□□ -0.18
CLDN12P56749 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN12P56749 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN12P56749 MIR4515-201ENST00000584082 81 ntBASIC13.92□□□□□ -0.18
CLDN12P56749 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
CLDN12P56749 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms