Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 Z97205.2-201ENST00000564697 1639 ntBASIC13.95□□□□□ -0.18
FOXG1P55316 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
FOXG1P55316 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
FOXG1P55316 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.95□□□□□ -0.18
FOXG1P55316 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.95□□□□□ -0.18
FOXG1P55316 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FOXG1P55316 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.95□□□□□ -0.18
FOXG1P55316 SRD5A3P1-201ENST00000603021 949 ntBASIC13.95□□□□□ -0.18
FOXG1P55316 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
FOXG1P55316 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXG1P55316 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXG1P55316 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
FOXG1P55316 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
FOXG1P55316 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXG1P55316 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXG1P55316 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
FOXG1P55316 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.94□□□□□ -0.18
FOXG1P55316 AC136604.1-201ENST00000418535 575 ntBASIC13.94□□□□□ -0.18
FOXG1P55316 FAM207CP-201ENST00000443486 507 ntBASIC13.94□□□□□ -0.18
FOXG1P55316 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXG1P55316 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.94□□□□□ -0.18
FOXG1P55316 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.94□□□□□ -0.18
FOXG1P55316 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.94□□□□□ -0.18
FOXG1P55316 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.94□□□□□ -0.18
FOXG1P55316 AC074044.1-201ENST00000609673 707 ntBASIC13.94□□□□□ -0.18
FOXG1P55316 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXG1P55316 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXG1P55316 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
FOXG1P55316 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.94□□□□□ -0.18
FOXG1P55316 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.94□□□□□ -0.18
FOXG1P55316 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
FOXG1P55316 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FOXG1P55316 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
FOXG1P55316 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
FOXG1P55316 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FOXG1P55316 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms