Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.95■□□□□ 0.46
USP11P51784 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
USP11P51784 AC015922.1-201ENST00000421102 1152 ntBASIC17.95■□□□□ 0.46
USP11P51784 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 MEIS3P1-201ENST00000495167 958 ntBASIC17.95■□□□□ 0.46
USP11P51784 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.95■□□□□ 0.46
USP11P51784 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
USP11P51784 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
USP11P51784 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP11P51784 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.94■□□□□ 0.46
USP11P51784 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP11P51784 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP11P51784 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP11P51784 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP11P51784 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.94■□□□□ 0.46
USP11P51784 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.94■□□□□ 0.46
USP11P51784 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.94■□□□□ 0.46
USP11P51784 SLED1-202ENST00000512051 380 ntBASIC17.94■□□□□ 0.46
USP11P51784 DOC2GP-202ENST00000514950 1163 ntBASIC17.94■□□□□ 0.46
USP11P51784 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.94■□□□□ 0.46
USP11P51784 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP11P51784 AC104794.3-201ENST00000566840 1248 ntBASIC17.94■□□□□ 0.46
USP11P51784 MIR3197-201ENST00000582241 73 ntBASIC17.94■□□□□ 0.46
USP11P51784 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
USP11P51784 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
USP11P51784 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP11P51784 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP11P51784 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.94■□□□□ 0.46
USP11P51784 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.94■□□□□ 0.46
USP11P51784 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.93■□□□□ 0.46
USP11P51784 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.93■□□□□ 0.46
USP11P51784 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.93■□□□□ 0.46
USP11P51784 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.93■□□□□ 0.46
USP11P51784 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.93■□□□□ 0.46
USP11P51784 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
USP11P51784 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
USP11P51784 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.93■□□□□ 0.46
USP11P51784 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.93■□□□□ 0.46
USP11P51784 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.93■□□□□ 0.46
USP11P51784 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.93■□□□□ 0.46
USP11P51784 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USP11P51784 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
USP11P51784 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USP11P51784 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP11P51784 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
USP11P51784 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.93■□□□□ 0.46
USP11P51784 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.93■□□□□ 0.46
USP11P51784 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.92■□□□□ 0.46
USP11P51784 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.92■□□□□ 0.46
USP11P51784 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP11P51784 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.92■□□□□ 0.46
USP11P51784 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.92■□□□□ 0.46
USP11P51784 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms