Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.57■□□□□ 0.4
GPC3P51654 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GPC3P51654 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.56■□□□□ 0.4
GPC3P51654 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GPC3P51654 AC098614.1-201ENST00000368528 745 ntBASIC17.56■□□□□ 0.4
GPC3P51654 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
GPC3P51654 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.56■□□□□ 0.4
GPC3P51654 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.56■□□□□ 0.4
GPC3P51654 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 TIMM17BP1-201ENST00000545713 516 ntBASIC17.56■□□□□ 0.4
GPC3P51654 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.56■□□□□ 0.4
GPC3P51654 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.56■□□□□ 0.4
GPC3P51654 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.56■□□□□ 0.4
GPC3P51654 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 AC134407.2-201ENST00000625089 1978 ntBASIC17.56■□□□□ 0.4
GPC3P51654 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.56■□□□□ 0.4
GPC3P51654 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC3P51654 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC3P51654 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.55■□□□□ 0.4
GPC3P51654 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 AC022188.1-201ENST00000620960 1664 ntBASIC17.55■□□□□ 0.4
GPC3P51654 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.55■□□□□ 0.4
GPC3P51654 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.55■□□□□ 0.4
GPC3P51654 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GPC3P51654 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.55■□□□□ 0.4
GPC3P51654 MEIS3P1-201ENST00000495167 958 ntBASIC17.55■□□□□ 0.4
GPC3P51654 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.55■□□□□ 0.4
GPC3P51654 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GPC3P51654 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.55■□□□□ 0.4
GPC3P51654 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.55■□□□□ 0.4
GPC3P51654 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GPC3P51654 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.55■□□□□ 0.4
GPC3P51654 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
GPC3P51654 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC3P51654 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.55■□□□□ 0.4
GPC3P51654 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
GPC3P51654 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.54■□□□□ 0.4
GPC3P51654 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
GPC3P51654 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.54■□□□□ 0.4
GPC3P51654 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
GPC3P51654 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.54■□□□□ 0.4
GPC3P51654 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 AC074338.1-201ENST00000416825 156 ntBASIC17.54■□□□□ 0.4
GPC3P51654 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.54■□□□□ 0.4
GPC3P51654 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.54■□□□□ 0.4
GPC3P51654 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.54■□□□□ 0.4
GPC3P51654 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GPC3P51654 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms