Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.39□□□□□ -0.11
ATRXP46100 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.39□□□□□ -0.11
ATRXP46100 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.39□□□□□ -0.11
ATRXP46100 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.39□□□□□ -0.11
ATRXP46100 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.39□□□□□ -0.11
ATRXP46100 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.39□□□□□ -0.11
ATRXP46100 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.39□□□□□ -0.11
ATRXP46100 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.39□□□□□ -0.11
ATRXP46100 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ATRXP46100 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.39□□□□□ -0.11
ATRXP46100 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.39□□□□□ -0.11
ATRXP46100 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ATRXP46100 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.38□□□□□ -0.11
ATRXP46100 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 SAMD11P1-201ENST00000571429 661 ntBASIC14.38□□□□□ -0.11
ATRXP46100 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ATRXP46100 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 KRT18P64-201ENST00000434946 1219 ntBASIC14.38□□□□□ -0.11
ATRXP46100 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.38□□□□□ -0.11
ATRXP46100 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.38□□□□□ -0.11
ATRXP46100 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ATRXP46100 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.37□□□□□ -0.11
ATRXP46100 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ATRXP46100 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.37□□□□□ -0.11
ATRXP46100 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 POU5F1P6-201ENST00000466990 990 ntBASIC14.37□□□□□ -0.11
ATRXP46100 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.37□□□□□ -0.11
ATRXP46100 AC019193.1-201ENST00000506678 823 ntBASIC14.37□□□□□ -0.11
ATRXP46100 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.37□□□□□ -0.11
ATRXP46100 AC087045.2-201ENST00000606279 1003 ntBASIC14.37□□□□□ -0.11
ATRXP46100 AC007663.3-201ENST00000609632 465 ntBASIC14.37□□□□□ -0.11
ATRXP46100 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.37□□□□□ -0.11
ATRXP46100 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.37□□□□□ -0.11
ATRXP46100 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ATRXP46100 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 AC074338.1-201ENST00000416825 156 ntBASIC14.37□□□□□ -0.11
ATRXP46100 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.37□□□□□ -0.11
ATRXP46100 AC092171.5-201ENST00000608012 942 ntBASIC14.37□□□□□ -0.11
ATRXP46100 MIR6842-201ENST00000612539 65 ntBASIC14.37□□□□□ -0.11
ATRXP46100 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.37□□□□□ -0.11
ATRXP46100 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.37□□□□□ -0.11
ATRXP46100 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATRXP46100 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ATRXP46100 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ATRXP46100 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.36□□□□□ -0.11
ATRXP46100 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ATRXP46100 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.36□□□□□ -0.11
ATRXP46100 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATRXP46100 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.36□□□□□ -0.11
ATRXP46100 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms