Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.99■□□□□ 0.47
PRPHP41219 AC051619.7-201ENST00000568314 623 ntBASIC17.99■□□□□ 0.47
PRPHP41219 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.99■□□□□ 0.47
PRPHP41219 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.99■□□□□ 0.47
PRPHP41219 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.99■□□□□ 0.47
PRPHP41219 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.99■□□□□ 0.47
PRPHP41219 AL589739.1-201ENST00000607720 493 ntBASIC17.99■□□□□ 0.47
PRPHP41219 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.99■□□□□ 0.47
PRPHP41219 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
PRPHP41219 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PRPHP41219 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRPHP41219 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.99■□□□□ 0.47
PRPHP41219 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRPHP41219 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.99■□□□□ 0.47
PRPHP41219 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.99■□□□□ 0.47
PRPHP41219 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PRPHP41219 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRPHP41219 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRPHP41219 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.99■□□□□ 0.47
PRPHP41219 AC103702.1-201ENST00000548801 2630 ntBASIC17.99■□□□□ 0.47
PRPHP41219 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRPHP41219 AC020658.6-201ENST00000623564 1870 ntBASIC17.99■□□□□ 0.47
PRPHP41219 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.99■□□□□ 0.47
PRPHP41219 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PRPHP41219 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.98■□□□□ 0.47
PRPHP41219 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 AC004449.1-201ENST00000564240 433 ntBASIC17.98■□□□□ 0.47
PRPHP41219 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 AC006538.3-201ENST00000612495 578 ntBASIC17.98■□□□□ 0.47
PRPHP41219 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PRPHP41219 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.98■□□□□ 0.47
PRPHP41219 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PRPHP41219 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRPHP41219 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.97■□□□□ 0.47
PRPHP41219 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.97■□□□□ 0.47
PRPHP41219 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PRPHP41219 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.97■□□□□ 0.47
PRPHP41219 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PRPHP41219 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PRPHP41219 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.97■□□□□ 0.47
PRPHP41219 KLF2P3-201ENST00000451977 1087 ntBASIC17.97■□□□□ 0.47
PRPHP41219 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 AC067863.1-201ENST00000494933 530 ntBASIC17.97■□□□□ 0.47
PRPHP41219 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.97■□□□□ 0.47
PRPHP41219 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.97■□□□□ 0.47
PRPHP41219 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.97■□□□□ 0.47
PRPHP41219 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.97■□□□□ 0.47
PRPHP41219 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PRPHP41219 AC132872.4-202ENST00000622924 2756 ntBASIC17.97■□□□□ 0.47
PRPHP41219 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PRPHP41219 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
PRPHP41219 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PRPHP41219 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRPHP41219 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms