Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.98□□□□□ -0.17
GDNFP39905 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GDNFP39905 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDNFP39905 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
GDNFP39905 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 AC097376.2-205ENST00000610159 5334 ntBASIC13.97□□□□□ -0.17
GDNFP39905 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GDNFP39905 LINC00552-201ENST00000625151 2579 ntBASIC13.97□□□□□ -0.17
GDNFP39905 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 AC007686.3-201ENST00000619017 3487 ntBASIC13.97□□□□□ -0.17
GDNFP39905 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GDNFP39905 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.97□□□□□ -0.17
GDNFP39905 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.97□□□□□ -0.17
GDNFP39905 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 AL031284.1-201ENST00000419297 478 ntBASIC13.97□□□□□ -0.17
GDNFP39905 AC087163.2-201ENST00000457299 853 ntBASIC13.97□□□□□ -0.17
GDNFP39905 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.97□□□□□ -0.17
GDNFP39905 SLC25A6P2-201ENST00000497974 877 ntBASIC13.97□□□□□ -0.17
GDNFP39905 AC136632.2-201ENST00000512891 861 ntBASIC13.97□□□□□ -0.17
GDNFP39905 SLC25A6P4-201ENST00000586535 553 ntBASIC13.97□□□□□ -0.17
GDNFP39905 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.97□□□□□ -0.17
GDNFP39905 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 AL356488.2-201ENST00000602755 427 ntBASIC13.97□□□□□ -0.17
GDNFP39905 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.97□□□□□ -0.17
GDNFP39905 AL773604.1-201ENST00000617417 272 ntBASIC13.97□□□□□ -0.17
GDNFP39905 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.97□□□□□ -0.17
GDNFP39905 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GDNFP39905 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 AC131009.4-201ENST00000624048 1740 ntBASIC13.97□□□□□ -0.17
GDNFP39905 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
GDNFP39905 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 AC232323.1-201ENST00000540724 2099 ntBASIC13.97□□□□□ -0.17
GDNFP39905 REXO1L5P-201ENST00000622260 2098 ntBASIC13.97□□□□□ -0.17
GDNFP39905 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
GDNFP39905 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDNFP39905 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.97□□□□□ -0.17
GDNFP39905 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.96□□□□□ -0.17
GDNFP39905 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.96□□□□□ -0.17
GDNFP39905 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.96□□□□□ -0.17
GDNFP39905 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.96□□□□□ -0.17
GDNFP39905 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.96□□□□□ -0.17
GDNFP39905 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
GDNFP39905 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDNFP39905 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
GDNFP39905 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.96□□□□□ -0.17
GDNFP39905 AC092910.1-201ENST00000482027 1129 ntBASIC13.96□□□□□ -0.17
GDNFP39905 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.96□□□□□ -0.17
GDNFP39905 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.96□□□□□ -0.17
GDNFP39905 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.96□□□□□ -0.17
GDNFP39905 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
GDNFP39905 AC020765.3-201ENST00000613051 740 ntBASIC13.96□□□□□ -0.17
GDNFP39905 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms