Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 MRPS18AP1-201ENST00000414458 589 ntBASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 AC126755.1-201ENST00000525846 6405 ntBASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
CCNYL3P0C7X3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 ME2P1-201ENST00000426028 1970 ntBASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCNYL3P0C7X3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.46■□□□□ 0.07
CCNYL3P0C7X3 AC026979.3-201ENST00000607315 403 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms