Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CAPNS1P04632 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPNS1P04632 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPNS1P04632 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPNS1P04632 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPNS1P04632 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPNS1P04632 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 HAUS4P1-201ENST00000406739 1145 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 AC142381.1-201ENST00000426099 345 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 GNAQP1-201ENST00000444815 1067 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPNS1P04632 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 AL138918.1-201ENST00000568306 659 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 AC005412.3-201ENST00000580309 715 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CAPNS1P04632 TEX28P1-201ENST00000613479 1221 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 TEX28P2-201ENST00000617764 1221 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPNS1P04632 COX11-210ENST00000639671 696 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPNS1P04632 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CAPNS1P04632 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPNS1P04632 AC012569.1-201ENST00000591191 1524 ntBASIC15.89■□□□□ 0.13
CAPNS1P04632 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPNS1P04632 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPNS1P04632 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPNS1P04632 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPNS1P04632 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPNS1P04632 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.88■□□□□ 0.13
CAPNS1P04632 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CAPNS1P04632 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPNS1P04632 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CAPNS1P04632 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 AC068587.10-201ENST00000641210 219 ntBASIC15.88■□□□□ 0.13
CAPNS1P04632 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CAPNS1P04632 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPNS1P04632 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.88■□□□□ 0.13
CAPNS1P04632 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CAPNS1P04632 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPNS1P04632 AP3S2-216ENST00000617003 1561 ntBASIC15.87■□□□□ 0.13
CAPNS1P04632 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPNS1P04632 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPNS1P04632 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPNS1P04632 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPNS1P04632 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms