Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.81□□□□□ -0.2
HLA-DQB1P01920 AC092135.3-201ENST00000624151 1846 ntBASIC13.8□□□□□ -0.2
HLA-DQB1P01920 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 AC139887.3-201ENST00000568585 713 ntBASIC13.8□□□□□ -0.2
HLA-DQB1P01920 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 AC092119.3-201ENST00000612618 583 ntBASIC13.8□□□□□ -0.2
HLA-DQB1P01920 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 AC129492.6-201ENST00000611383 1305 ntBASIC13.8□□□□□ -0.2
HLA-DQB1P01920 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 WASH6P-202ENST00000359512 1437 ntBASIC13.8□□□□□ -0.2
HLA-DQB1P01920 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.8□□□□□ -0.2
HLA-DQB1P01920 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HLA-DQB1P01920 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms