Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
IFNA1P01562 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.69□□□□□ -0.38
IFNA1P01562 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IFNA1P01562 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IFNA1P01562 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IFNA1P01562 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IFNA1P01562 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
IFNA1P01562 AC148477.4-201ENST00000613430 1793 ntBASIC12.69□□□□□ -0.38
IFNA1P01562 CSPG4P11-201ENST00000560634 4910 ntBASIC12.69□□□□□ -0.38
IFNA1P01562 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
IFNA1P01562 CICP14-201ENST00000629111 2732 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 BEND3P1-201ENST00000421591 1944 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 AC011477.6-201ENST00000604980 1927 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 AC126365.1-201ENST00000578585 1514 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 AL137784.3-201ENST00000623858 2288 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 MMP23A-201ENST00000234610 1017 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.68□□□□□ -0.38
IFNA1P01562 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.68□□□□□ -0.38
IFNA1P01562 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.68□□□□□ -0.38
IFNA1P01562 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.68□□□□□ -0.38
IFNA1P01562 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 AC011840.4-201ENST00000578471 627 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 AL023973.1-201ENST00000624619 620 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 AP001350.2-201ENST00000625104 1094 ntBASIC12.68□□□□□ -0.38
IFNA1P01562 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
IFNA1P01562 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
IFNA1P01562 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.68□□□□□ -0.38
IFNA1P01562 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.68□□□□□ -0.38
IFNA1P01562 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
IFNA1P01562 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
IFNA1P01562 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
IFNA1P01562 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.67□□□□□ -0.38
IFNA1P01562 STARP1-201ENST00000397973 869 ntBASIC12.67□□□□□ -0.38
IFNA1P01562 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.67□□□□□ -0.38
IFNA1P01562 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.67□□□□□ -0.38
IFNA1P01562 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.67□□□□□ -0.38
IFNA1P01562 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.67□□□□□ -0.38
IFNA1P01562 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.67□□□□□ -0.38
IFNA1P01562 AC005336.2-201ENST00000593183 939 ntBASIC12.67□□□□□ -0.38
IFNA1P01562 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.67□□□□□ -0.38
IFNA1P01562 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
IFNA1P01562 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
IFNA1P01562 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms