Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC114501.2-201ENST00000439631 535 ntBASIC16.83■□□□□ 0.28
RTN3O95197 SPTLC1P1-201ENST00000447199 261 ntBASIC16.83■□□□□ 0.28
RTN3O95197 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 COX20P2-201ENST00000452636 358 ntBASIC16.83■□□□□ 0.28
RTN3O95197 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.83■□□□□ 0.28
RTN3O95197 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.83■□□□□ 0.28
RTN3O95197 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.83■□□□□ 0.28
RTN3O95197 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
RTN3O95197 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
RTN3O95197 AC190387.1-201ENST00000551683 408 ntBASIC16.83■□□□□ 0.28
RTN3O95197 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RTN3O95197 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN3O95197 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN3O95197 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN3O95197 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.82■□□□□ 0.28
RTN3O95197 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RTN3O95197 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN3O95197 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN3O95197 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN3O95197 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RTN3O95197 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN3O95197 PIN1P1-201ENST00000412108 996 ntBASIC16.82■□□□□ 0.28
RTN3O95197 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RTN3O95197 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN3O95197 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN3O95197 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.82■□□□□ 0.28
RTN3O95197 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.82■□□□□ 0.28
RTN3O95197 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.82■□□□□ 0.28
RTN3O95197 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.82■□□□□ 0.28
RTN3O95197 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.82■□□□□ 0.28
RTN3O95197 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.82■□□□□ 0.28
RTN3O95197 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.82■□□□□ 0.28
RTN3O95197 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 AC024909.3-201ENST00000611513 2257 ntBASIC16.82■□□□□ 0.28
RTN3O95197 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN3O95197 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RTN3O95197 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.82■□□□□ 0.28
RTN3O95197 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN3O95197 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 BNIP3P1-202ENST00000550043 1585 ntBASIC16.81■□□□□ 0.28
RTN3O95197 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.81■□□□□ 0.28
RTN3O95197 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.81■□□□□ 0.28
RTN3O95197 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.81■□□□□ 0.28
RTN3O95197 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.81■□□□□ 0.28
RTN3O95197 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.81■□□□□ 0.28
RTN3O95197 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
RTN3O95197 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTN3O95197 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 AC022188.1-201ENST00000620960 1664 ntBASIC16.81■□□□□ 0.28
RTN3O95197 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RTN3O95197 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms