Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ALX3O95076 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALX3O95076 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALX3O95076 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ALX3O95076 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.22□□□□□ -0.13
ALX3O95076 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ALX3O95076 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ALX3O95076 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 AL592424.1-201ENST00000563624 1536 ntBASIC14.21□□□□□ -0.13
ALX3O95076 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
ALX3O95076 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 AC067930.6-201ENST00000623257 4947 ntBASIC14.21□□□□□ -0.13
ALX3O95076 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ALX3O95076 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.21□□□□□ -0.13
ALX3O95076 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.21□□□□□ -0.13
ALX3O95076 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.21□□□□□ -0.13
ALX3O95076 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.21□□□□□ -0.13
ALX3O95076 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ALX3O95076 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.21□□□□□ -0.13
ALX3O95076 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.21□□□□□ -0.13
ALX3O95076 AC008735.5-201ENST00000623544 497 ntBASIC14.21□□□□□ -0.13
ALX3O95076 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ALX3O95076 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.21□□□□□ -0.13
ALX3O95076 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ALX3O95076 AC126755.1-201ENST00000525846 6405 ntBASIC14.21□□□□□ -0.13
ALX3O95076 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
ALX3O95076 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ALX3O95076 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ALX3O95076 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
ALX3O95076 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.21□□□□□ -0.14
ALX3O95076 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ALX3O95076 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ALX3O95076 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ALX3O95076 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ALX3O95076 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ALX3O95076 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.21□□□□□ -0.14
ALX3O95076 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.21□□□□□ -0.14
ALX3O95076 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ALX3O95076 AC012569.1-201ENST00000591191 1524 ntBASIC14.2□□□□□ -0.14
ALX3O95076 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
ALX3O95076 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
ALX3O95076 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
ALX3O95076 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.2□□□□□ -0.14
ALX3O95076 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.2□□□□□ -0.14
ALX3O95076 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 COL6A4P2-202ENST00000504443 2753 ntBASIC14.2□□□□□ -0.14
ALX3O95076 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.2□□□□□ -0.14
ALX3O95076 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 LINC00552-201ENST00000625151 2579 ntBASIC14.2□□□□□ -0.14
ALX3O95076 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ALX3O95076 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.2□□□□□ -0.14
ALX3O95076 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.2□□□□□ -0.14
ALX3O95076 UNC93B7-201ENST00000509439 705 ntBASIC14.2□□□□□ -0.14
ALX3O95076 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.2□□□□□ -0.14
ALX3O95076 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ALX3O95076 MIR1199-201ENST00000621445 119 ntBASIC14.2□□□□□ -0.14
ALX3O95076 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.2□□□□□ -0.14
ALX3O95076 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.2□□□□□ -0.14
ALX3O95076 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
ALX3O95076 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ALX3O95076 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ALX3O95076 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms