Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.12■□□□□ 0.17
PRAMEF11O60813 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 FAM8A3P-201ENST00000427218 844 ntBASIC16.11■□□□□ 0.17
PRAMEF11O60813 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 SLED1-202ENST00000512051 380 ntBASIC16.11■□□□□ 0.17
PRAMEF11O60813 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.11■□□□□ 0.17
PRAMEF11O60813 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF11O60813 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF11O60813 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 AC008741.2-201ENST00000612792 3115 ntBASIC16.1■□□□□ 0.17
PRAMEF11O60813 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.1■□□□□ 0.17
PRAMEF11O60813 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 SPDYE18-201ENST00000510091 1050 ntBASIC16.1■□□□□ 0.17
PRAMEF11O60813 AC092337.1-201ENST00000568699 1129 ntBASIC16.1■□□□□ 0.17
PRAMEF11O60813 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 AF228730.6-201ENST00000641497 218 ntBASIC16.1■□□□□ 0.17
PRAMEF11O60813 AC084121.3-201ENST00000641716 218 ntBASIC16.1■□□□□ 0.17
PRAMEF11O60813 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF11O60813 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF11O60813 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.09■□□□□ 0.17
PRAMEF11O60813 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF11O60813 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF11O60813 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms