Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15□□□□□ -0.01
HCN1O60741 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15□□□□□ -0.01
HCN1O60741 Z92544.3-201ENST00000624747 417 ntBASIC15□□□□□ -0.01
HCN1O60741 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HCN1O60741 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15□□□□□ -0.01
HCN1O60741 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HCN1O60741 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HCN1O60741 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
HCN1O60741 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
HCN1O60741 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15□□□□□ -0.01
HCN1O60741 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15□□□□□ -0.01
HCN1O60741 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HCN1O60741 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15□□□□□ -0.01
HCN1O60741 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
HCN1O60741 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.99□□□□□ -0.01
HCN1O60741 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.99□□□□□ -0.01
HCN1O60741 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.99□□□□□ -0.01
HCN1O60741 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.99□□□□□ -0.01
HCN1O60741 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 AC105233.2-201ENST00000523697 349 ntBASIC14.99□□□□□ -0.01
HCN1O60741 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 AF228730.5-201ENST00000530288 346 ntBASIC14.99□□□□□ -0.01
HCN1O60741 SLC25A39P2-201ENST00000537614 270 ntBASIC14.99□□□□□ -0.01
HCN1O60741 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.99□□□□□ -0.01
HCN1O60741 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.99□□□□□ -0.01
HCN1O60741 AC011467.4-201ENST00000594891 528 ntBASIC14.99□□□□□ -0.01
HCN1O60741 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.99□□□□□ -0.01
HCN1O60741 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.99□□□□□ -0.01
HCN1O60741 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.99□□□□□ -0.01
HCN1O60741 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.99□□□□□ -0.01
HCN1O60741 AC093512.1-201ENST00000617969 520 ntBASIC14.99□□□□□ -0.01
HCN1O60741 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 REXO1L8P-201ENST00000604378 1897 ntBASIC14.99□□□□□ -0.01
HCN1O60741 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.99□□□□□ -0.01
HCN1O60741 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HCN1O60741 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
HCN1O60741 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HCN1O60741 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.98□□□□□ -0.01
HCN1O60741 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HCN1O60741 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.98□□□□□ -0.01
HCN1O60741 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HCN1O60741 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.98□□□□□ -0.01
HCN1O60741 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HCN1O60741 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HCN1O60741 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.98□□□□□ -0.01
HCN1O60741 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.98□□□□□ -0.01
HCN1O60741 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HCN1O60741 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
HCN1O60741 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms