Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 AZGP1P1-201ENST00000411909 902 ntBASIC14.21□□□□□ -0.13
TRAF3IP2O43734 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 AC015911.4-201ENST00000588022 1070 ntBASIC14.21□□□□□ -0.13
TRAF3IP2O43734 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAF3IP2O43734 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF3IP2O43734 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF3IP2O43734 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF3IP2O43734 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF3IP2O43734 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF3IP2O43734 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF3IP2O43734 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAF3IP2O43734 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 PHKG1P2-201ENST00000457537 863 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 HNRNPUP1-201ENST00000554987 333 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 AL079307.3-201ENST00000556114 283 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 AC025678.2-201ENST00000562061 970 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 AC004449.1-201ENST00000564240 433 ntBASIC14.2□□□□□ -0.14
TRAF3IP2O43734 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAF3IP2O43734 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms