Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CASQ2O14958 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASQ2O14958 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASQ2O14958 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASQ2O14958 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CASQ2O14958 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.21■□□□□ 0.02
CASQ2O14958 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASQ2O14958 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CASQ2O14958 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 U82695.1-201ENST00000635752 1889 ntBASIC15.2■□□□□ 0.02
CASQ2O14958 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 AC007686.3-201ENST00000619017 3487 ntBASIC15.2■□□□□ 0.02
CASQ2O14958 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.2■□□□□ 0.02
CASQ2O14958 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.2■□□□□ 0.02
CASQ2O14958 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.2■□□□□ 0.02
CASQ2O14958 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CASQ2O14958 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.2■□□□□ 0.02
CASQ2O14958 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.2■□□□□ 0.02
CASQ2O14958 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CASQ2O14958 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 AL353135.1-201ENST00000606729 504 ntBASIC15.2■□□□□ 0.02
CASQ2O14958 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.2■□□□□ 0.02
CASQ2O14958 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CASQ2O14958 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CASQ2O14958 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
CASQ2O14958 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.2■□□□□ 0.02
CASQ2O14958 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CASQ2O14958 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.19■□□□□ 0.02
CASQ2O14958 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
CASQ2O14958 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 SIGLEC16-201ENST00000599858 1437 ntBASIC15.19■□□□□ 0.02
CASQ2O14958 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
CASQ2O14958 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 TSPY7P-201ENST00000431358 1114 ntBASIC15.19■□□□□ 0.02
CASQ2O14958 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CASQ2O14958 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.19■□□□□ 0.02
CASQ2O14958 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.19■□□□□ 0.02
CASQ2O14958 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 AL355075.4-201ENST00000554988 638 ntBASIC15.19■□□□□ 0.02
CASQ2O14958 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 AL031595.1-201ENST00000623969 4709 ntBASIC15.19■□□□□ 0.02
CASQ2O14958 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.19■□□□□ 0.02
CASQ2O14958 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.19■□□□□ 0.02
CASQ2O14958 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.19■□□□□ 0.02
CASQ2O14958 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASQ2O14958 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CASQ2O14958 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.19■□□□□ 0.02
CASQ2O14958 SLC22A20-204ENST00000530038 1673 ntBASIC15.19■□□□□ 0.02
CASQ2O14958 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms