Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 REXO1L1P-202ENST00000608646 1974 ntBASIC13.95□□□□□ -0.18
CCL21O00585 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CCL21O00585 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL21O00585 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL21O00585 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 KRT8P13-201ENST00000463294 1010 ntBASIC13.95□□□□□ -0.18
CCL21O00585 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.95□□□□□ -0.18
CCL21O00585 KRT18P43-201ENST00000469825 1281 ntBASIC13.95□□□□□ -0.18
CCL21O00585 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL21O00585 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CCL21O00585 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL21O00585 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.95□□□□□ -0.18
CCL21O00585 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL21O00585 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 RNF216P1-203ENST00000404404 2427 ntBASIC13.95□□□□□ -0.18
CCL21O00585 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL21O00585 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CCL21O00585 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCL21O00585 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL21O00585 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL21O00585 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL21O00585 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL21O00585 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 MIR326-201ENST00000362220 95 ntBASIC13.94□□□□□ -0.18
CCL21O00585 ACKR1-201ENST00000368121 1240 ntBASIC13.94□□□□□ -0.18
CCL21O00585 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL21O00585 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.94□□□□□ -0.18
CCL21O00585 AC006033.1-201ENST00000440505 426 ntBASIC13.94□□□□□ -0.18
CCL21O00585 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL21O00585 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL21O00585 AP001582.1-201ENST00000525856 295 ntBASIC13.94□□□□□ -0.18
CCL21O00585 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.94□□□□□ -0.18
CCL21O00585 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL21O00585 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.94□□□□□ -0.18
CCL21O00585 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.94□□□□□ -0.18
CCL21O00585 AC093813.1-201ENST00000605066 256 ntBASIC13.94□□□□□ -0.18
CCL21O00585 AL022328.3-201ENST00000607943 679 ntBASIC13.94□□□□□ -0.18
CCL21O00585 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCL21O00585 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCL21O00585 AC134407.2-201ENST00000625089 1978 ntBASIC13.94□□□□□ -0.18
CCL21O00585 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms