Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.73□□□□□ -0.53
SMKR1H3BMG3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 KRT17P6-201ENST00000453795 1220 ntBASIC11.73□□□□□ -0.53
SMKR1H3BMG3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 BX276092.5-203ENST00000456199 560 ntBASIC11.73□□□□□ -0.53
SMKR1H3BMG3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 SLC25A6P2-201ENST00000497974 877 ntBASIC11.73□□□□□ -0.53
SMKR1H3BMG3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 PI4KAP1-204ENST00000612579 1703 ntBASIC11.73□□□□□ -0.53
SMKR1H3BMG3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 AL390755.1-201ENST00000623716 2027 ntBASIC11.73□□□□□ -0.53
SMKR1H3BMG3 AC133561.5-201ENST00000635547 218 ntBASIC11.73□□□□□ -0.53
SMKR1H3BMG3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMKR1H3BMG3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 AC015656.1-201ENST00000624209 3578 ntBASIC11.72□□□□□ -0.53
SMKR1H3BMG3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 GRK6P1-201ENST00000400595 1711 ntBASIC11.72□□□□□ -0.53
SMKR1H3BMG3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 LINC01230-201ENST00000625222 3017 ntBASIC11.72□□□□□ -0.53
SMKR1H3BMG3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 AL139424.1-201ENST00000607572 797 ntBASIC11.72□□□□□ -0.53
SMKR1H3BMG3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.72□□□□□ -0.53
SMKR1H3BMG3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMKR1H3BMG3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms