Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.77□□□□□ -0.53
NACAE9PAV3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.77□□□□□ -0.53
NACAE9PAV3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
NACAE9PAV3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.77□□□□□ -0.53
NACAE9PAV3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.77□□□□□ -0.53
NACAE9PAV3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.77□□□□□ -0.53
NACAE9PAV3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NACAE9PAV3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
NACAE9PAV3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.77□□□□□ -0.53
NACAE9PAV3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.77□□□□□ -0.53
NACAE9PAV3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.77□□□□□ -0.53
NACAE9PAV3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.77□□□□□ -0.53
NACAE9PAV3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.77□□□□□ -0.53
NACAE9PAV3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.77□□□□□ -0.53
NACAE9PAV3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
NACAE9PAV3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
NACAE9PAV3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NACAE9PAV3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 AC092919.2-201ENST00000623631 1645 ntBASIC11.76□□□□□ -0.53
NACAE9PAV3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.76□□□□□ -0.53
NACAE9PAV3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.76□□□□□ -0.53
NACAE9PAV3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
NACAE9PAV3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 PMS2P4-201ENST00000412466 1052 ntBASIC11.76□□□□□ -0.53
NACAE9PAV3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 YBX1P5-201ENST00000509441 847 ntBASIC11.76□□□□□ -0.53
NACAE9PAV3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.76□□□□□ -0.53
NACAE9PAV3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.76□□□□□ -0.53
NACAE9PAV3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.76□□□□□ -0.53
NACAE9PAV3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.76□□□□□ -0.53
NACAE9PAV3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NACAE9PAV3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
NACAE9PAV3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.75□□□□□ -0.53
NACAE9PAV3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.75□□□□□ -0.53
NACAE9PAV3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.75□□□□□ -0.53
NACAE9PAV3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
NACAE9PAV3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.75□□□□□ -0.53
NACAE9PAV3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
NACAE9PAV3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.75□□□□□ -0.53
NACAE9PAV3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.75□□□□□ -0.53
NACAE9PAV3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
NACAE9PAV3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.75□□□□□ -0.53
NACAE9PAV3 AC144831.1-201ENST00000573312 2656 ntBASIC11.75□□□□□ -0.53
NACAE9PAV3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NACAE9PAV3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms