Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 AL450472.2-201ENST00000603663 1156 ntBASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 AL162274.1-201ENST00000617191 1098 ntBASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.85■□□□□ 0.13
TBC1D3FA6NER0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 AC017083.2-201ENST00000608069 979 ntBASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TBC1D3FA6NER0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TBC1D3FA6NER0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TBC1D3FA6NER0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TBC1D3FA6NER0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TBC1D3FA6NER0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TBC1D3FA6NER0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TBC1D3FA6NER0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TBC1D3FA6NER0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AC074338.1-201ENST00000416825 156 ntBASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AC007389.4-201ENST00000454674 793 ntBASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 KRT17P8-201ENST00000540749 863 ntBASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 RAB43P1-201ENST00000561790 589 ntBASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 AL158212.4-201ENST00000624062 1286 ntBASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms