Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC21.27■■□□□ 1
SBNO1A3KN83 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
SBNO1A3KN83 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC21.27■■□□□ 1
SBNO1A3KN83 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC21.27■■□□□ 1
SBNO1A3KN83 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.27■■□□□ 1
SBNO1A3KN83 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC21.27■■□□□ 1
SBNO1A3KN83 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC21.27■■□□□ 1
SBNO1A3KN83 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC21.27■■□□□ 1
SBNO1A3KN83 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SBNO1A3KN83 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SBNO1A3KN83 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.27■■□□□ 1
SBNO1A3KN83 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SBNO1A3KN83 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SBNO1A3KN83 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SBNO1A3KN83 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SBNO1A3KN83 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 SNX1-214ENST00000625244 324 ntTSL 5 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SBNO1A3KN83 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.26■□□□□ 0.99
SBNO1A3KN83 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 MIR4722-201ENST00000578292 60 ntBASIC21.25■□□□□ 0.99
SBNO1A3KN83 RN7SL48P-201ENST00000579283 293 ntBASIC21.25■□□□□ 0.99
SBNO1A3KN83 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 AC006449.6-201ENST00000612330 2296 ntBASIC21.25■□□□□ 0.99
SBNO1A3KN83 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC21.25■□□□□ 0.99
SBNO1A3KN83 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SBNO1A3KN83 AL138799.1-201ENST00000448213 1675 ntBASIC21.25■□□□□ 0.99
SBNO1A3KN83 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SBNO1A3KN83 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SBNO1A3KN83 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SBNO1A3KN83 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.24■□□□□ 0.99
SBNO1A3KN83 GGCT-203ENST00000409144 836 ntTSL 2 BASIC21.24■□□□□ 0.99
SBNO1A3KN83 HINT2P1-201ENST00000419438 481 ntBASIC21.24■□□□□ 0.99
SBNO1A3KN83 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC21.24■□□□□ 0.99
SBNO1A3KN83 RN7SL769P-201ENST00000469386 295 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms