Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC66A2RUB6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC66A2RUB6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC66A2RUB6 LINC01101-201ENST00000622953 1884 ntBASIC17.39■□□□□ 0.38
CCDC66A2RUB6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CCDC66A2RUB6 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CCDC66A2RUB6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC66A2RUB6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC66A2RUB6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 PRAL-201ENST00000624952 3286 ntBASIC17.39■□□□□ 0.37
CCDC66A2RUB6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 AC073621.1-201ENST00000392730 636 ntBASIC17.39■□□□□ 0.37
CCDC66A2RUB6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.39■□□□□ 0.37
CCDC66A2RUB6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 REXO1L8P-201ENST00000604378 1897 ntBASIC17.39■□□□□ 0.37
CCDC66A2RUB6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC66A2RUB6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 AC136632.2-201ENST00000512891 861 ntBASIC17.38■□□□□ 0.37
CCDC66A2RUB6 AF238378.1-201ENST00000526806 358 ntBASIC17.38■□□□□ 0.37
CCDC66A2RUB6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 AC041040.2-201ENST00000622926 2899 ntBASIC17.38■□□□□ 0.37
CCDC66A2RUB6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 REXO1L2P-201ENST00000425429 2069 ntBASIC17.38■□□□□ 0.37
CCDC66A2RUB6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC66A2RUB6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.37■□□□□ 0.37
CCDC66A2RUB6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC66A2RUB6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms