Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 AL035456.1-201ENST00000456064 1369 ntBASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.76■□□□□ 0.59
PTPDC1A2A3K4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 AC092384.3-202ENST00000564646 2873 ntBASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 RN7SL828P-201ENST00000607615 303 ntBASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPDC1A2A3K4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 CICP13-201ENST00000422015 2789 ntBASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 AC105021.1-202ENST00000570572 669 ntBASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 AL589739.1-201ENST00000607720 493 ntBASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 AC008761.3-201ENST00000624803 892 ntBASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 LINC00554-201ENST00000564841 3011 ntBASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 AL691432.1-201ENST00000596308 1422 ntBASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPDC1A2A3K4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 AC092850.2-201ENST00000623821 2697 ntBASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 HLA-V-204ENST00000476601 1289 ntBASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPDC1A2A3K4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms