Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC008677.1-201ENST00000519230 1561 ntBASIC12.9□□□□□ -0.35
TCRBV4S1A1TA0A5B7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.9□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MIR346-201ENST00000362234 95 ntBASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC055876.3-201ENST00000431496 288 ntBASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SPDYE14P-201ENST00000442619 822 ntBASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL512638.1-201ENST00000457493 794 ntBASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC051619.7-201ENST00000568314 623 ntBASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC138649.4-201ENST00000612222 287 ntBASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC084121.4-201ENST00000641598 221 ntBASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AF228730.8-201ENST00000642140 221 ntBASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms