Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 RPL37AP1-201ENST00000412502 279 ntBASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 HIST3H2BA-201ENST00000436555 524 ntBASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 SPDYE12P-201ENST00000618416 771 ntBASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 AP003680.1-201ENST00000598970 3660 ntBASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC196A0A1B0GTZ2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC136604.1-201ENST00000418535 575 ntBASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 AL138828.2-201ENST00000615812 383 ntBASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC196A0A1B0GTZ2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 AC027369.6-201ENST00000525520 931 ntBASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 HNRNPUP1-201ENST00000554987 333 ntBASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 MIR4313-201ENST00000580760 101 ntBASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 TEX28P1-201ENST00000613479 1221 ntBASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 TEX28P2-201ENST00000617764 1221 ntBASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 AL033527.5-202ENST00000641632 1098 ntBASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC196A0A1B0GTZ2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CCDC196A0A1B0GTZ2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms