Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF346Q9UL40 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 MIR346-201ENST00000362234 95 ntBASIC14.4□□□□□ -0.1
ZNF346Q9UL40 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 AC142381.1-201ENST00000426099 345 ntBASIC14.4□□□□□ -0.1
ZNF346Q9UL40 ADH5P3-201ENST00000433842 1137 ntBASIC14.4□□□□□ -0.1
ZNF346Q9UL40 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 SPCS2P4-201ENST00000436160 681 ntBASIC14.4□□□□□ -0.1
ZNF346Q9UL40 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 RN7SL589P-201ENST00000481268 310 ntBASIC14.4□□□□□ -0.1
ZNF346Q9UL40 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 KRT8P48-201ENST00000515599 1220 ntBASIC14.4□□□□□ -0.1
ZNF346Q9UL40 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 AL691432.1-201ENST00000596308 1422 ntBASIC14.4□□□□□ -0.1
ZNF346Q9UL40 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF346Q9UL40 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AC112482.1-201ENST00000492080 688 ntBASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AC079140.1-201ENST00000508039 487 ntBASIC14.39□□□□□ -0.11
ZNF346Q9UL40 RNA5SP410-201ENST00000516285 106 ntBASIC14.39□□□□□ -0.11
ZNF346Q9UL40 IGHV3-62-201ENST00000520057 340 ntBASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AC243562.2-201ENST00000561247 970 ntBASIC14.39□□□□□ -0.11
ZNF346Q9UL40 LINC01225-203ENST00000563550 1244 ntBASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AP000842.3-202ENST00000569238 1080 ntBASIC14.39□□□□□ -0.11
ZNF346Q9UL40 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 AC139530.3-201ENST00000620344 690 ntBASIC14.39□□□□□ -0.11
ZNF346Q9UL40 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF346Q9UL40 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms