Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 AC092850.2-201ENST00000623821 2697 ntBASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 AC244107.1-201ENST00000442033 332 ntBASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 INTS4P2-202ENST00000614726 2019 ntBASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NPC1L1Q9UHC9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 AC008894.3-201ENST00000624324 3103 ntBASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 RPL13AP25-201ENST00000484130 612 ntBASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 CTBP2P3-201ENST00000585629 1255 ntBASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 RPSAP52-203ENST00000622976 1023 ntBASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPC1L1Q9UHC9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 MYCLP2-201ENST00000449268 967 ntBASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPC1L1Q9UHC9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 AC105917.1-201ENST00000506637 2539 ntBASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPC1L1Q9UHC9 DGCR5-201ENST00000399539 862 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms