Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.76■□□□□ 0.11
MKS1Q9NXB0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
MKS1Q9NXB0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 AC105233.2-201ENST00000523697 349 ntBASIC15.75■□□□□ 0.11
MKS1Q9NXB0 AF228730.5-201ENST00000530288 346 ntBASIC15.75■□□□□ 0.11
MKS1Q9NXB0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 SPTSSB-204ENST00000617024 1292 ntBASIC15.75■□□□□ 0.11
MKS1Q9NXB0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MKS1Q9NXB0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 GRK6P1-201ENST00000400595 1711 ntBASIC15.74■□□□□ 0.11
MKS1Q9NXB0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 EMBP1-201ENST00000458200 901 ntBASIC15.74■□□□□ 0.11
MKS1Q9NXB0 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.74■□□□□ 0.11
MKS1Q9NXB0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.74■□□□□ 0.11
MKS1Q9NXB0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MKS1Q9NXB0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.73■□□□□ 0.11
MKS1Q9NXB0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MKS1Q9NXB0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
MKS1Q9NXB0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
MKS1Q9NXB0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.73■□□□□ 0.11
MKS1Q9NXB0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MKS1Q9NXB0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms