Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 FAM8A3P-201ENST00000427218 844 ntBASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 BX005266.1-201ENST00000473402 457 ntBASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 SLC25A6P2-201ENST00000497974 877 ntBASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 AC091951.1-201ENST00000512854 2465 ntBASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCM2LQ9NUG4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 AC007191.1-201ENST00000623179 2995 ntBASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 HCG4-201ENST00000418983 998 ntBASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 LAGE3P1-201ENST00000425356 484 ntBASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 MIR4469-201ENST00000583919 79 ntBASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 AL589182.2-201ENST00000619332 1049 ntBASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 AL022326.1-202ENST00000641533 845 ntBASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCM2LQ9NUG4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms