Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC106886.1-201ENST00000568660 600 ntBASIC16.53■□□□□ 0.24
HPS4Q9NQG7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
HPS4Q9NQG7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 TTTY23B-201ENST00000442790 549 ntBASIC16.52■□□□□ 0.24
HPS4Q9NQG7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 AC017083.2-201ENST00000608069 979 ntBASIC16.52■□□□□ 0.24
HPS4Q9NQG7 WFDC1-204ENST00000613603 549 ntBASIC16.52■□□□□ 0.24
HPS4Q9NQG7 MIR8072-201ENST00000614241 80 ntBASIC16.52■□□□□ 0.24
HPS4Q9NQG7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HPS4Q9NQG7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.52■□□□□ 0.23
HPS4Q9NQG7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 MIR1909-201ENST00000411312 80 ntBASIC16.51■□□□□ 0.23
HPS4Q9NQG7 TMEM14DP-201ENST00000422205 345 ntBASIC16.51■□□□□ 0.23
HPS4Q9NQG7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 RRP7BP-205ENST00000566851 833 ntBASIC16.51■□□□□ 0.23
HPS4Q9NQG7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.51■□□□□ 0.23
HPS4Q9NQG7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms