Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 RNU1-114P-201ENST00000365297 166 ntBASIC14.5□□□□□ -0.09
CHD8Q9HCK8 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AC243562.2-201ENST00000561247 970 ntBASIC14.5□□□□□ -0.09
CHD8Q9HCK8 NAP1L6-202ENST00000641404 1222 ntBASIC14.5□□□□□ -0.09
CHD8Q9HCK8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 LETM1P2-201ENST00000597330 2178 ntBASIC14.5□□□□□ -0.09
CHD8Q9HCK8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AL138799.1-201ENST00000448213 1675 ntBASIC14.5□□□□□ -0.09
CHD8Q9HCK8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 RPL18AP3-201ENST00000462885 528 ntBASIC14.5□□□□□ -0.09
CHD8Q9HCK8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 LINC00431-202ENST00000636375 159 ntBASIC14.5□□□□□ -0.09
CHD8Q9HCK8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.5□□□□□ -0.09
CHD8Q9HCK8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL357563.1-201ENST00000404728 395 ntBASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 RN7SL396P-201ENST00000471086 295 ntBASIC14.49□□□□□ -0.09
CHD8Q9HCK8 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 KRT8P21-201ENST00000430398 1491 ntBASIC14.49□□□□□ -0.09
CHD8Q9HCK8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL136309.1-201ENST00000403917 691 ntBASIC14.49□□□□□ -0.09
CHD8Q9HCK8 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AC084752.1-201ENST00000509766 622 ntBASIC14.49□□□□□ -0.09
CHD8Q9HCK8 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL132994.2-201ENST00000603120 687 ntBASIC14.49□□□□□ -0.09
CHD8Q9HCK8 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.49□□□□□ -0.09
CHD8Q9HCK8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHD8Q9HCK8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms