Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH20Q9HBT6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.02□□□□□ -0.16
CDH20Q9HBT6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 MTND6P24-201ENST00000440466 518 ntBASIC14.02□□□□□ -0.17
CDH20Q9HBT6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 AC092183.1-201ENST00000469884 875 ntBASIC14.02□□□□□ -0.17
CDH20Q9HBT6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH20Q9HBT6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AL035456.1-201ENST00000456064 1369 ntBASIC14.01□□□□□ -0.17
CDH20Q9HBT6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AC125807.1-201ENST00000483097 614 ntBASIC14.01□□□□□ -0.17
CDH20Q9HBT6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CDH20Q9HBT6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms