Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC19.68■□□□□ 0.74
UPF2Q9HAU5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 OR7E14P-202ENST00000530490 1290 ntBASIC19.67■□□□□ 0.74
UPF2Q9HAU5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.67■□□□□ 0.74
UPF2Q9HAU5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 AC092127.1-201ENST00000567093 3455 ntBASIC19.66■□□□□ 0.74
UPF2Q9HAU5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 HMGA1P7-201ENST00000406908 502 ntBASIC19.66■□□□□ 0.74
UPF2Q9HAU5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 MIR3652-201ENST00000579335 131 ntBASIC19.66■□□□□ 0.74
UPF2Q9HAU5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 LINC01711-201ENST00000598340 967 ntBASIC19.66■□□□□ 0.74
UPF2Q9HAU5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF2Q9HAU5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 FAM185BP-201ENST00000443595 716 ntBASIC19.65■□□□□ 0.74
UPF2Q9HAU5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 AC091304.2-201ENST00000564639 760 ntBASIC19.65■□□□□ 0.74
UPF2Q9HAU5 ACTL9-202ENST00000612068 1252 ntBASIC19.65■□□□□ 0.74
UPF2Q9HAU5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 AL645728.2-201ENST00000641974 660 ntBASIC19.65■□□□□ 0.74
UPF2Q9HAU5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF2Q9HAU5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms