Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXRED1Q96CU9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 IL9RP2-201ENST00000423948 1312 ntBASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 KRT18P34-201ENST00000488218 1270 ntBASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 AL049840.3-201ENST00000602669 611 ntBASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 ACTL9-202ENST00000612068 1252 ntBASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXRED1Q96CU9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 AL009178.2-201ENST00000597278 2719 ntBASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 ZNF259P1-201ENST00000407656 1365 ntBASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.96□□□□□ -0.18
FOXRED1Q96CU9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 AP003680.1-201ENST00000598970 3660 ntBASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 AP002414.3-201ENST00000589352 1468 ntBASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 AL022342.1-201ENST00000400363 863 ntBASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 CXCL1P1-201ENST00000502804 216 ntBASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 AC012640.2-201ENST00000561606 901 ntBASIC13.95□□□□□ -0.18
FOXRED1Q96CU9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms