Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SMG8Q8ND04 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMG8Q8ND04 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMG8Q8ND04 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 AL121723.1-201ENST00000445194 1519 ntBASIC17.08■□□□□ 0.32
SMG8Q8ND04 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.08■□□□□ 0.32
SMG8Q8ND04 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 AC133539.2-201ENST00000604757 467 ntBASIC17.08■□□□□ 0.32
SMG8Q8ND04 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMG8Q8ND04 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.08■□□□□ 0.32
SMG8Q8ND04 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 KRT8P22-201ENST00000562317 1415 ntBASIC17.07■□□□□ 0.32
SMG8Q8ND04 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 AC007274.1-201ENST00000439805 662 ntBASIC17.07■□□□□ 0.32
SMG8Q8ND04 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 RAB43P1-201ENST00000561790 589 ntBASIC17.07■□□□□ 0.32
SMG8Q8ND04 AC124283.3-201ENST00000570869 594 ntBASIC17.07■□□□□ 0.32
SMG8Q8ND04 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 AC000095.1-201ENST00000603208 874 ntBASIC17.07■□□□□ 0.32
SMG8Q8ND04 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
SMG8Q8ND04 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMG8Q8ND04 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 USP32P1-208ENST00000506594 1164 ntBASIC17.06■□□□□ 0.32
SMG8Q8ND04 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMG8Q8ND04 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.06■□□□□ 0.32
SMG8Q8ND04 AL049840.4-201ENST00000602422 811 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms