Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.34■□□□□ 0.21
SIX5Q8N196 AL118558.3-201ENST00000607414 1079 ntBASIC16.34■□□□□ 0.21
SIX5Q8N196 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.34■□□□□ 0.21
SIX5Q8N196 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SIX5Q8N196 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SIX5Q8N196 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.34■□□□□ 0.21
SIX5Q8N196 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SIX5Q8N196 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIX5Q8N196 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SIX5Q8N196 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.33■□□□□ 0.21
SIX5Q8N196 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.33■□□□□ 0.21
SIX5Q8N196 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.33■□□□□ 0.21
SIX5Q8N196 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 AL031731.1-201ENST00000642131 2094 ntBASIC16.33■□□□□ 0.21
SIX5Q8N196 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIX5Q8N196 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.33■□□□□ 0.2
SIX5Q8N196 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SIX5Q8N196 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SIX5Q8N196 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.33■□□□□ 0.2
SIX5Q8N196 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.33■□□□□ 0.2
SIX5Q8N196 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.33■□□□□ 0.2
SIX5Q8N196 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.33■□□□□ 0.2
SIX5Q8N196 AC134915.1-201ENST00000426461 574 ntBASIC16.33■□□□□ 0.2
SIX5Q8N196 AC016694.1-201ENST00000434179 700 ntBASIC16.33■□□□□ 0.2
SIX5Q8N196 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.33■□□□□ 0.2
SIX5Q8N196 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.33■□□□□ 0.2
SIX5Q8N196 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.33■□□□□ 0.2
SIX5Q8N196 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.33■□□□□ 0.2
SIX5Q8N196 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.33■□□□□ 0.2
SIX5Q8N196 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.33■□□□□ 0.2
SIX5Q8N196 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 CROCCP2-202ENST00000412962 2773 ntBASIC16.33■□□□□ 0.2
SIX5Q8N196 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SIX5Q8N196 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
SIX5Q8N196 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIX5Q8N196 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.33■□□□□ 0.2
SIX5Q8N196 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.33■□□□□ 0.2
SIX5Q8N196 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 LINC00554-201ENST00000564841 3011 ntBASIC16.32■□□□□ 0.2
SIX5Q8N196 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.32■□□□□ 0.2
SIX5Q8N196 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.32■□□□□ 0.2
SIX5Q8N196 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIX5Q8N196 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms