Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.55□□□□□ -0.08
CROCCP3Q8IVE0 CES1P1-201ENST00000421606 1704 ntBASIC14.55□□□□□ -0.08
CROCCP3Q8IVE0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CROCCP3Q8IVE0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AC092127.1-201ENST00000567093 3455 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 SIGLEC30P-201ENST00000455569 941 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AC009533.2-201ENST00000543664 586 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AL355075.4-201ENST00000554988 638 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AC073592.5-201ENST00000624854 528 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PGM5P2-202ENST00000637225 1043 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 AL031731.1-201ENST00000642131 2094 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PPT1-213ENST00000641319 2388 ntBASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CROCCP3Q8IVE0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 Z83836.1-201ENST00000624605 1642 ntBASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 KRT8P39-201ENST00000396270 1433 ntBASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 AP003680.1-201ENST00000598970 3660 ntBASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CROCCP3Q8IVE0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms