Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 MIR3687-2-201ENST00000577708 61 ntBASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 MIR3687-1-201ENST00000614492 61 ntBASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AP005117.1-202ENST00000581724 1908 ntBASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AC011477.6-201ENST00000604980 1927 ntBASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NHLRC1Q6VVB1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 HLA-H-201ENST00000383620 1096 ntBASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 AP000344.2-201ENST00000512987 629 ntBASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NHLRC1Q6VVB1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 AP001282.1-201ENST00000531301 1499 ntBASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 UXT-AS1-201ENST00000590504 1525 ntBASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 RPS8P6-201ENST00000426177 609 ntBASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.38□□□□□ -0.11
NHLRC1Q6VVB1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms