Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 AC018892.3-201ENST00000623986 2499 ntBASIC15.27■□□□□ 0.04
PHC1P78364 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.27■□□□□ 0.04
PHC1P78364 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
PHC1P78364 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PHC1P78364 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PHC1P78364 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.27■□□□□ 0.04
PHC1P78364 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.27■□□□□ 0.04
PHC1P78364 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.27■□□□□ 0.04
PHC1P78364 AC099522.2-201ENST00000607001 744 ntBASIC15.27■□□□□ 0.04
PHC1P78364 AC092865.6-201ENST00000642101 219 ntBASIC15.27■□□□□ 0.04
PHC1P78364 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.27■□□□□ 0.03
PHC1P78364 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.27■□□□□ 0.03
PHC1P78364 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.27■□□□□ 0.03
PHC1P78364 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.27■□□□□ 0.03
PHC1P78364 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHC1P78364 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PHC1P78364 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
PHC1P78364 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PHC1P78364 AC074386.1-202ENST00000463561 864 ntBASIC15.26■□□□□ 0.03
PHC1P78364 RPL13AP23-201ENST00000480739 586 ntBASIC15.26■□□□□ 0.03
PHC1P78364 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.26■□□□□ 0.03
PHC1P78364 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.26■□□□□ 0.03
PHC1P78364 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.26■□□□□ 0.03
PHC1P78364 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.26■□□□□ 0.03
PHC1P78364 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.26■□□□□ 0.03
PHC1P78364 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 AC073389.1-201ENST00000595595 795 ntBASIC15.26■□□□□ 0.03
PHC1P78364 AC068137.2-201ENST00000605408 478 ntBASIC15.26■□□□□ 0.03
PHC1P78364 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.26■□□□□ 0.03
PHC1P78364 AL161645.1-201ENST00000622716 1255 ntBASIC15.26■□□□□ 0.03
PHC1P78364 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 AC138035.3-201ENST00000622706 2791 ntBASIC15.26■□□□□ 0.03
PHC1P78364 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.26■□□□□ 0.03
PHC1P78364 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
PHC1P78364 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHC1P78364 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.25■□□□□ 0.03
PHC1P78364 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.25■□□□□ 0.03
PHC1P78364 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHC1P78364 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms