Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 AC008406.3-201ENST00000620001 1374 ntBASIC12.03□□□□□ -0.48
HIST1H2BCP62807 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H2BCP62807 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 DMBT1P1-203ENST00000636837 4628 ntBASIC12.02□□□□□ -0.48
HIST1H2BCP62807 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
HIST1H2BCP62807 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 AP002414.1-201ENST00000391405 1147 ntBASIC12.02□□□□□ -0.49
HIST1H2BCP62807 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 AC005332.3-201ENST00000589904 676 ntBASIC12.02□□□□□ -0.49
HIST1H2BCP62807 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H2BCP62807 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H2BCP62807 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms