Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
DEFA3P59666 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.06□□□□□ -0.16
DEFA3P59666 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.06□□□□□ -0.16
DEFA3P59666 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
DEFA3P59666 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.06□□□□□ -0.16
DEFA3P59666 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
DEFA3P59666 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
DEFA3P59666 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA3P59666 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
DEFA3P59666 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
DEFA3P59666 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
DEFA3P59666 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
DEFA3P59666 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA3P59666 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 AC069152.1-201ENST00000438030 544 ntBASIC14.05□□□□□ -0.16
DEFA3P59666 AC007663.1-201ENST00000438948 1240 ntBASIC14.05□□□□□ -0.16
DEFA3P59666 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.05□□□□□ -0.16
DEFA3P59666 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.05□□□□□ -0.16
DEFA3P59666 RN7SL471P-201ENST00000580476 299 ntBASIC14.05□□□□□ -0.16
DEFA3P59666 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.05□□□□□ -0.16
DEFA3P59666 AC020765.3-201ENST00000613051 740 ntBASIC14.05□□□□□ -0.16
DEFA3P59666 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
DEFA3P59666 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA3P59666 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA3P59666 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA3P59666 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
DEFA3P59666 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
DEFA3P59666 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA3P59666 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA3P59666 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
DEFA3P59666 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.04□□□□□ -0.16
DEFA3P59666 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.04□□□□□ -0.16
DEFA3P59666 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
DEFA3P59666 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
DEFA3P59666 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
DEFA3P59666 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
DEFA3P59666 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
DEFA3P59666 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.04□□□□□ -0.16
DEFA3P59666 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.04□□□□□ -0.16
DEFA3P59666 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
DEFA3P59666 FAM220CP-201ENST00000395253 831 ntBASIC14.04□□□□□ -0.16
DEFA3P59666 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.04□□□□□ -0.16
DEFA3P59666 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA3P59666 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.04□□□□□ -0.16
DEFA3P59666 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.04□□□□□ -0.16
DEFA3P59666 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.04□□□□□ -0.16
DEFA3P59666 AC010653.2-201ENST00000623505 997 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms