Protein–RNA interactions for Protein: P55735

SEC13, Protein SEC13 homolog, humanhuman

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P55735 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 SOCS2P1-201ENST00000417727 557 ntBASIC16.07■□□□□ 0.16
SEC13P55735 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 PHKG1P2-201ENST00000457537 863 ntBASIC16.07■□□□□ 0.16
SEC13P55735 VDAC1P7-201ENST00000462417 847 ntBASIC16.07■□□□□ 0.16
SEC13P55735 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.07■□□□□ 0.16
SEC13P55735 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.07■□□□□ 0.16
SEC13P55735 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.07■□□□□ 0.16
SEC13P55735 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 AL022328.1-201ENST00000610050 478 ntBASIC16.07■□□□□ 0.16
SEC13P55735 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.07■□□□□ 0.16
SEC13P55735 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.07■□□□□ 0.16
SEC13P55735 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.07■□□□□ 0.16
SEC13P55735 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC13P55735 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SEC13P55735 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SEC13P55735 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC13P55735 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC13P55735 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.06■□□□□ 0.16
SEC13P55735 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC13P55735 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC13P55735 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 AC093525.8-201ENST00000624099 1342 ntBASIC16.06■□□□□ 0.16
SEC13P55735 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SEC13P55735 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SEC13P55735 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC13P55735 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC13P55735 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC13P55735 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC13P55735 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.06■□□□□ 0.16
SEC13P55735 RN7SL219P-201ENST00000582872 296 ntBASIC16.06■□□□□ 0.16
SEC13P55735 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.06■□□□□ 0.16
SEC13P55735 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.06■□□□□ 0.16
SEC13P55735 AL450472.2-201ENST00000603663 1156 ntBASIC16.06■□□□□ 0.16
SEC13P55735 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.06■□□□□ 0.16
SEC13P55735 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.06■□□□□ 0.16
SEC13P55735 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SEC13P55735 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SEC13P55735 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SEC13P55735 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SEC13P55735 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SEC13P55735 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC13P55735 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SEC13P55735 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC13P55735 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC13P55735 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC13P55735 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC13P55735 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SEC13P55735 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC13P55735 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.05■□□□□ 0.16
SEC13P55735 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC13P55735 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC13P55735 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms